ClusterProt
Cluster same length proteins using only their structures.
Algorithm for clustering proteins of the same length using their structural information. Can be useful for identifying alternative protein conformations structurally or for identifying impacts of same length mutants on structures.
Estimated resource cost: 0.000124
Categories: Utilities & Conversions
Tags: Conformation Generation Protein Clustering Proteins
Key Capabilities
- Creates a 2D projection and cluster of a set of input proteins of same length.
- Proteins within closer proximity will have more similar structures.
- Can be used to identify protein conformations from a set of predicted structures.
- Produces an animation of each protein sorted by similarity.
Runtime Statistics
| Metric | Value |
|---|---|
| runtime_mean | 419 |
| runtime_median | 186 |
| runtime_std | 613 |
| runtime_90th_percentile | 1260 |
| runtime_max | 3521 |
Similar Tools
- Kluster
- Foldseek Structural Clustering
- LDDT Structural Comparison
- PDB Animator
Ready to submit your job?
Review your configuration, then confirm the estimated credit cost before you run the job. Note that credit estimates are not guaranteed and runtime can vary depending on inputs and settings.
Estimated Credits: 0.000124
Invite-only, limited-time access. Please contact ztang@getantibody.com.
Invite-only, limited-time access. Please contact ztang@getantibody.com.