LDDT Structural Comparison
Evaluate protein structure quality with a superposition-free local distance difference score
LDDT (Local Distance Difference Test) is a superposition-free score for assessing local and global structural similarity between protein models and reference structures. Unlike alignment-based metrics, LDDT compares interatomic distance differences, making it robust against domain movements and ideal for evaluating model accuracy without the need for structural superposition.
Estimated resource cost: 0.000062
Categories: Utilities & Conversions
Tags: Proteins Structural Alignment
Key Capabilities
- Provides a superposition-free comparison of protein models and reference structures.
- Measures both local and global structural quality using interatomic distance differences.
- Robust against domain movements, making it suitable for flexible and multi-domain proteins.
- Enables reliable assessment of protein models in CASP and related benchmarking studies.
Runtime Statistics
| Metric | Value |
|---|---|
| runtime_mean | 0 |
| runtime_median | 0 |
| runtime_std | 0 |
| runtime_90th_percentile | 0 |
| runtime_max | 0 |
Similar Tools
- USalign Structural Alignment
- ClusterProt
- Foldseek Structural Clustering
- Kluster
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Estimated Credits: 0.000062
Invite-only, limited-time access. Please contact ztang@getantibody.com.
Invite-only, limited-time access. Please contact ztang@getantibody.com.